preprints
Fellows SR, Araya-Donoso R, Davalos-Dehullu E, Khan R, Weisz D, Dudchenko O, Lieberman AE, Munguia-Vega A, Dolby GA, Edwards DL, (preprint) A chromosome-length reference genome for the common side-blotched lizard Uta stansburiana and gene expression data reveals fast pace-of-life comes with environmental stability. preprint: https://doi.org/10.1101/2025.05.28.656178
Moore DG, Morales M, Walker SI, Dolby GA (preprint) The information signature of diverging lineages. Prepint: https://doi.org/10.1101/2021.08.30.458276
Maag G, Biddy AR, Stokes M, Dolby GA, (preprint) A river runs through it: Causal graphs capture rivers’ complex control on the genetic structure of populations. Preprint: link.
2025
Darin, MH, Dorsey, RJ, Niemi, TM, Salgado Muñoz, VO, Henry, MW, and Pecha, M, (2025) Depositional age of the Boleo Formation and marine flooding in the central Gulf of California Rift, Santa Rosalía basin, Baja California Sur, México, in Riggs, NR, Putirka, K, and Wakabayashi, J, eds, The Virtue of Fieldwork in Volcanology, Sedimentology, Structural Geology, and Tectonics – Celebrating the Career of Cathy Busby: Geological Society of America Special Paper 563, 23. p, https://doi.org/10.1130/2025.2563(13)
Gardner, KK, Dorsey, RJ (2025) Planform geometric classification of fluvial and tidal channels via machine learning. Earth Surface Processes and Landforms, 50(4), e70010, https://doi.org/10.1002/esp.70010 .
2024
Araya-Donoso R, Biddy A, Munguia-Vega A, Lira-Noriega A, Dolby GA (2024), Habitat quality or quantity? Changes in niche marginality suggest adaptive pressure differences in 22 species of plants and animals Ecography. 9, https://doiorg/101111/ecog07391
2023
Davalos-Dehullu L, Baty SM, Fisher RN, Scott PA, Dolby GA, Munguia-Vega A, Cortez D, (2023) Chromosome-level genome assembly of the blacktail brush lizard, Urosaurus nigricaudus, reveals dosage compensation in an endemic lizard. Genome Biology and Evolution. https://doi.org/10.1093/gbe/evad210
Vargas KL, Kraberger S, Custer JM, Paietta EN, Culver M, Dolby GA, Varsani A (2023) Identification of a novel polyomavirus in wild Sonoran Desert rodents of the family Heteromyidae. Archives of Virology. https://doi.org/10.1007/s00705-023-05877-5
2022
Araya-Donoso R, Baty SM, Alonso-Alonso P, Sanín MJ, Wilder BT, Munguía-Vega A, Dolby GA (2022), Implications of barrier ephemerality and generation time in Geogenomic research. Journal of Biogeography. https://doi.org/10.1111/jbi.14487
Dolby GA, Bennett SEK, Dorsey RJ, Stokes M, Riddle BR, Lira-Noriega A, Munguia-Vega A, Wilder B, (2022) Integrating Earth-life systems: A geogenomics approach. Trends in Ecology and Evolution (TREE). https://doi.org/10.1016/j.tree.2021.12.004
2021
Dolby GA (2021) Towards a unified framework to study causality in Earth-life systems, Molecular Ecology, 30, 5628–5642. paper
2025
Bacteriophage diversity and biogeographic dynamics in wild rodents from Baja California peninsula link
Vargas et al, Mexico Arizona and New Mexico Chapters of The Wildlife Society and AZ/NM Chapter of the American Fisheries Society 58th Joint Annual Meeting, Albuquerque, NM
Recent demographic history and climate-driven adaptations in a desert plant, Encelia farinosa
Andreev et al, Botany, Palm Springs, California
Genetic structure and natural selection of the Northern Baja Deer Mouse (Peromyscus fraterculus)
Hein et al, 48th West Coast Biological Sciences Undergraduate Research Conference, San Marcos, California
Genetic Structure and Natural Selection of the Northern Baja Deer Mouse (Peromyscus fraterculus)
Hein et al, ENViSion conference, Tucson, Arizona
Recent evolutionary history and current population structure of Peromyscus eremicus species complex from Baja California
Andreev et al, 58th Joint Annual Meeting of the Arizona and New Mexico Chapters of the Wildlife Society, Albuquerque, New Mexico
Using directed graphs to test the riverine barrier hypothesis with genetic data link
Dolby, Society for Integrative and Comparative Biology (SICB), Atlanta, Georgia.
Strong differential gene expression parallels clade divergence and ecological divergence in a Baja California endemic lizard (Urosaurus nigricaudus), link
Biddy et al, Society for Integrative and Comparative Biology (SICB), Atlanta, Georgia.
Neogene volcano-tectonic evolution of the central Baja California Peninsula, Mexico, https://gsa.confex.com/gsa/2025CD/meetingapp.cgi/Paper/409916
Bennett et al, GSA Cordilleran Section Meeting, Sacramento, CA.
2024
Bacteriophage diversity and biogeographic dynamics in wild rodents from Baja California peninsula, Mexico
Vargas et al, Arizona Postdoctoral Research Conference, Tucson, Arizona
DNA viral diversity associated with Baja California wild rodents
Vargas et al, Arizona and New Mexico Chapters of The Wildlife Society and AZ/NM Chapter of the American Fisheries Society 57th Joint Annual Meeting, Flagstaff, Arizona
Population structure and demography of the Peromyscus eremicus species complex from Baja California
Andreev et al, Arizona Postdoctoral Research Conference, Tucson, Arizona
Patterns of genetic differentiation in two Baja California species
Andreev et al, 57th Joint Annual Meeting of the Arizona and New Mexico Chapters of the Wildlife Society, Flagstaff, Arizona
A new working model for co-evolution of plant and animal species on the Baja California peninsula from genomic and geologic data https://gsa.confex.com/gsa/2024AM/meetingapp.cgi/Paper/404092
Dolby et al, Geological Society of America, Anaheim, CA.
Differential gene expression is constrained by clade divergence and microclimate in a Baja California endemic lizard (Urosaurus nigricaudus)
Biddy et al, Society for the Study of Evolution (SSE), Montreal, Canada.
Comparative genomic analyses of two desert adapted shrub species, Encelia farinosa and E. californica, shows conservation of synteny and species-level gene duplications.
Baty et al, Society for the Study of Evolution (SSE), Montreal, Canada.
Capturing the nuance of physiographic barriers: an example from rivers link
Dolby, North American Paleontological Convention, Ann Arbor, MI.
Miocene tectonic evolution of the central Baja California peninsula and rapid marine flooding into the Gulf of California at ca. 6.3-6.4 Ma https://gsa.confex.com/gsa/2024AM/webprogram/Paper402328.html
Dorsey et al, Geological Society of America, Anaheim, CA.
Submarine emplacement of a late Miocene volcanic landslide complex, central Baja California Peninsula, Mexico https://gsa.confex.com/gsa/2024AM/webprogram/Paper401950.html
Gardner et al, Geological Society of America, Anaheim, CA
Geometric analysis and classification of tidal and fluvial channel planforms via machine learning algorithms. https://agu.confex.com/agu/agu24/meetingapp.cgi/Paper/1597518
Gardner and Dorsey, AGU Fall Meeting, Washington, D.C.
Geología de la Sierra San Jorge, margen occidental de la rift del Golfo de California, peninsula central de Baja California, México. https://gsa.confex.com/gsa/2024AM/webprogram/Paper402193.html
Bennett et al, Geological Society of America, Anaheim, CA
2023
Identification of novel polyomavirus in wild Sonoran Desert rodents
Vargas KL et al, American Society for Virology 42nd Annual Meeting, Athens, Georgia
Identification of novel polyomavirus in wild Sonoran Desert rodents
Vargas et al, Annual Meeting of the Arizona and Southern Nevada Branch of the American Society for Microbiology, Tucson, Arizona
Building explicit causal frameworks in evolutionary genomics: From concept to analysis.
Dolby, Society for the Study of Evolution, Albuquerque, NM.
Submarine emplacement of a late Miocene volcanic landslide complex, central Baja California peninsula, Mexico. https://gsa.confex.com/gsa/2023CD/webprogram/Paper387418.html
Gardner et al, GSA Cordilleran Section, Las Vegas, NV
Geologic mapping and structural analysis of San Marcos Island, Baja California Sur, Mexico. https://gsa.confex.com/gsa/2023CD/webprogram/Paper387665.html
Morebeck et al, Geological Society of America, Pittsburgh, PA
2022
Stratigraphy, Sedimentology, Age, And Tectonic Significance Of The Upper Miocene Boleo Formation In The Santa Rosalia Basin, Baja California Sur, Mexico https://gsa.confex.com/gsa/2022AM/webprogram/Paper381103.html
Dorsey et al, Geological Society of America, Denver, CO
New Observations About The Structural Architecture Of The Gulf Of California Rift Margin In Baja California Sur: Lessons Learned From Paul Umhoefer’s Legacy. https://gsa.confex.com/gsa/2022AM/webprogram/Paper381850.html
Bennett et al, Geological Society of America, Denver, CO
Miocene-Pliocene volcanism in the Sierra San Francisco, central Baja California peninsula, Mexico. https://gsa.confex.com/gsa/2022CD/webprogram/Paper374066.html
Grandy et al, GSA Cordilleran Section Meeting, Las Vegas
Volcanic and topographic evolution of the Sierra San Francisco, Baja California Sur, Mexico https://gsa.confex.com/gsa/2022CD/webprogram/Paper373847.html
Hausback et al, GSA Cordilleran Section Meeting, Las Vegas, NV
The Baja Basins Program: Mentored undergraduate field and lab research integrating multidisciplinary geologic data to address the tectonic evolution of the Gulf of California rift of the east-central Baja Peninsula, México. https://gsa.confex.com/gsa/2022AM/webprogram/Paper380608.html
Niemi et al, Geological Society of America, Denver, CO
Stratigraphic analysis of the upper Miocene Boleo Formation at Arroyo Providencia, Baja California Sur, southwest margin of the paleo-Gulf of California. https://gsa.confex.com/gsa/2022AM/meetingapp.cgi/Paper/382039
Usher et al, GSA Annual Meeting, Denver, CO
2021
On understanding causal relationships within the Earth-life sciences https://agu.confex.com/agu/fm21/meetingapp.cgi/Paper/918125
Dolby, American Geophysical Union annual meeting, New Orleans, LA
Geochronological constraints on the volcanic and topographic evolution of central Baja California, Mexico https://agu.confex.com/agu/fm21/meetingapp.cgi/Paper/966010
Hausback et al, American Geophysical Union annual meeting, New Orleans, LA
Geometric and spectral analysis of relict channel planforms in central Baja California, Mexico: A novel approach to paleo-sea level reconstruction and testing hypotheses for genetic divergence https://gsa.confex.com/gsa/2021AM/webprogram/Paper368437.html
Gardner et al, American Geophysical Union annual meeting, New Orleans, LA
Using channel planform geometries to identify tidal channels on relict landscapes: A novel approach to tracking sea level change. https://doi.org/10.1130/abs/2021AM-368437
Gardner and Dorsey, GSA Fall Meeting, Portland, OR
Genetic divergence and ephemeral barriers: Reconciling genetic and geological timescale within geogenomics https://agu.confex.com/agu/fm21/meetingapp.cgi/Paper/988278
Araya-Donoso et al, American Geophysical Union annual meeting, New Orleans, LA
Drivers of speciation using genomic analysis of two desert brittlebush species, Encelia farinosa and Encelia californica https://agu.confex.com/agu/fm21/meetingapp.cgi/Paper/976169
Baty et al., American Geophysical Union annual meeting, New Orleans, LA
Volcano-tectonic evolution of central Baja California peninsula, Mexico: Implications for speciation and barriers to gene flow. https://agu.confex.com/agu/fm21/meetingapp.cgi/Paper/986894
Bennett et al, American Geophysical Union annual meeting, New Orleans, LA
Genome annotations and analyses of two recently diverged brittlebush species, Encelia farinosa and Encelia californica
Baty et al, Society for the Study of Evolution, Virtual
Using genetic simulations and climatic niches to test plant and animal population divergence on the Baja California peninsula
Araya-Donoso et al, Society for the Study of Evolution, Virtual
The information signature of diverging populations: Using partial information decomposition to study speciation.
Moore et al, Society for the Study of Evolution, Virtual
2020
Genomic and ecological signatures of landscape change: a geologically constrained, simulation-based case study in the Baja California Peninsula. https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/713147
Araya-Donoso et al, AGU Fall Meeting, Virtual
The influence of Miocene to recent tectonics and landscape evolution on genetic diversity along the Central Baja California Peninsula. https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/712864
Bennett et al, GSA Cordilleran Section Meeting, Pasadena, CA.
Long-lived subduction and post-subduction volcanism and incision in the Sierra San Francisco, Central Baja California Peninsula, Mexico. https://gsa.confex.com/gsa/2020CD/meetingapp.cgi/Paper/347422
Hausback et al, GSA Cordilleran Section Meeting, Pasadena, CA.
The influence of Miocene to recent tectonics and landscape evolution on genetic diversity along the central Baja California peninsula. https://gsa.confex.com/gsa/2020CD/webprogram/Paper347327.html
Bennett et al, GSA Cordilleran Section meeting, Pasadena, CA.
Can we use causal theory to understand how Earth processes shape life? Examples from the Baja California peninsula, MX, https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/708008
Dolby et al, AGU Fall Meeting, Virtual
New Discovery of Pliocene Tidal Deposits Near the Crest of the Central Baja California Peninsula: A Key Constraint on Vertical Crustal Motions and Genetic Divergence https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/679330
Dorsey et al, AGU Fall Meeting, Virtual
Late Miocene-Pliocene Volcanism in the Sierra de San Francisco, Central Baja Peninsula https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/704184
Grandy et al, AGU Fall Meeting, Virtual
Topographic and volcanic evolution of Central Baja California, Mexico: Constraints and evidence for a Pliocene marine embayment or trans-peninsular strait https://agu.confex.com/agu/fm20/meetingapp.cgi/Paper/713470
Hausback et al, AGU Fall Meeting, Virtual
2025 - Synthesis workshop, Boulder, Colorado, June 2025.
2024 - geo-bio data share workshop, Newport, Oregon, June 2024.
2023 - geo-bio data share workshop, Virtual (zoom), July 2023.
2022 - geo-bio data share workshop, Virtual (zoom), July 2022.
2022 - geo-bio Mule field trip, Sierra San Pedro Màrtir, Mexico, March 21-31, 2022.
2021 - PI meeting, zoom, July 26, 2021
2020 - all hands annual meeting, zoom, December 12, 2020
2020 - all hands data share workshop, zoom, July 21, 2020
2019 - geo-bio field trip, Baja California, Mexico, November 2019
2019 - all hands annual meeting, Decision Theater, Phoenix, Arizona, September 25, 2019
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